BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F05SP1|AL425731
(755 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig715 803 0.0
>3x_Contig715
Length = 2727
Score = 803 bits (405), Expect = 0.0
Identities = 513/545 (94%), Gaps = 3/545 (0%)
Strand = Plus / Plus
Query: 214 tgttagataaacatatgcgactcttttcctttttttattgaacaaaaaccacatcaatga 273
||||||||||| ||||| || | |||| ||||||||||||| ||||| | || |||||
Sbjct: 103 tgttagataaagatatgggagtgttttggtttttttattgaagaaaaaaaaaatgaatga 162
Query: 274 ccaaa-gatggccaggctcatcttcaagaaa-cgatttttgagggacatattgatagaaa 331
||| ||||| ||| | |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 163 gaaaaagatggaaaggataatcttcaagaaagcgatttttgagggacatattgatagaaa 222
Query: 332 gcgcaatcgttgatatccatatgtccgttgatcgtttcccagatccattcctgaggtggt 391
| | |||||||||||||||||||| |||||| |||| |||| ||||||||||||||
Sbjct: 223 gagaaatcgttgatatccatatgtaagttgatagtttaaaagataaattcctgaggtggt 282
Query: 392 tttcctaaagatatcaaggtattttcgaacttcgagatgaaacttttcttggtgcatttc 451
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tttaataaagatatcaaggtattttcgaacttcgagatgaaacttttcttggtgcatttc 342
Query: 452 acgaaatcggtgggctctaatgacgaaaaatcgtgatccggataggacgcattcaaaatg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 acgaaatcggtgggctctaatgacgaaaaatcgtgatccggataggacgcattcaaaatg 402
Query: 512 gctattagatacgcgaaag-tctcctgctagcagtttcgttgataggtccaaacggtcca 570
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gctattagatacgcgaaagctctcctgctagcagtttcgttgataggtccaaacggtcca 462
Query: 571 atatttacgttgtctcttccttgtaccgatgacctcctcctctgttggtatgaagtattt 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atatttacgttgtctcttccttgtaccgatgacctcctcctctgttggtatgaagtattt 522
Query: 631 tgtatttcattcgctgaaccacttgtgctaggtcttcttttcgaagtatcggtatggttg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgtatttcattcgctgaaccacttgtgctaggtcttcttttcgaagtatcggtatggttg 582
Query: 691 cttgcaatgcttccagcactgctagtcctccttaggaaactgggacgttgtgaagcgatc 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cttgcaatgcttccagcactgctagtcctccttaggaaactgggacgttgtgaagcgatc 642
Query: 751 cctaa 755
|||||
Sbjct: 643 cctaa 647
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6523
Number of Sequences: 1807
Number of extensions: 6523
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 755
length of database: 10,358,551
effective HSP length: 16
effective length of query: 739
effective length of database: 10,329,639
effective search space: 7633603221
effective search space used: 7633603221
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)